ECE365: Biological Data Analytics (Lectures)

You will be able to find the lecture topics and slides here.

  Lecture Topic Links Supplementary Resources
1 Introduction to Biology [lect1] Molecular Biology for Computer Scientists [link]
2 Expectation Maximization [lect2] Mixture Models and EM [link]
3 RNA-seq Technologies [lect3&4]  
4 Transcript Quantification [lect3&4] Original RSEM publication [link]
5 Differential Expression  [lect5]  
6 Differential Expression  [lect6&7] Linear Model of Differential Expression [link]
Design Matrix for Least Squares Regression [link]
7 Differential Expression  [lect6&7]  
8 Gene Set Enrichment Analysis [lect8]  
9 Gene Regulatory Networks   Guide to Weighted Gene Co-Expression
Network Analysis (WGCNA) [link]
Gene Regulatory Networks